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duminică, 5 august 2012

New Method Could Enable Reprogramming Of Mammalian Cells

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Main Category: Genetics
Also Included In: Biology / Biochemistry;  Stem Cell Research
Article Date: 04 Aug 2012 - 0:00 PDT Current ratings for:
New Method Could Enable Reprogramming Of Mammalian Cells
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Through the assembly of genetic components into "circuits" that perform logical operations in living cells, synthetic biologists aim to artificially empower cells to solve critical problems in medicine, energy and the environment. To succeed, however, they'll need far more reliable genetic components than the small number of "off-the-shelf" bacterial parts now available.

Now a new method developed by Boston University biomedical engineers Ahmad S. Khalil and James J. Collins -- and collaborators at Harvard Medical School, Massachusetts General Hospital and MIT -- could significantly increase the number of genetic components in synthetic biologists' toolkit and, as a result, the size and complexity of the genetic circuits they can build. The development could dramatically enhance their efforts not only to understand how biological organisms behave and develop, but also to reprogram them for a variety of practical applications.

Described in the August 2 online edition of Cell, the method offers a new paradigm for constructing and analyzing genetic circuits in eukaryotes -- or organisms whose cells contain nuclei, which include everything from yeasts to humans. Instead of constructing these circuits with off-the-shelf parts from bacteria and porting them into eukaryotes, as most synthetic biologists do, Khalil and his collaborators have engineered these circuits using modular, functional parts from the eukaryotes themselves.

With funding from the Howard Hughes Medical Institute, the Defense Advanced Research Projects Agency and other sources, the research team built their synthetic genetic circuit parts from a class of proteins, known as zinc fingers, which can be programmed to bind desired DNA sequences. The modularity of the new parts enables a wide range of functions to be engineered, the construction of much larger and more complex genetic circuits than what's now possible with bacteria-based parts, and ultimately, the development of much more powerful applications.

"Our research may lead to therapeutic applications, such as the dynamic modification and control of genes and genetic networks that are important in human disease," said Khalil. Potential medical applications include stem cell therapeutics for a wide variety of injuries and diseases and in-cell devices and circuits for diagnosing early stages of cancer and other diseases. The new method may also equip groups of cells to perform higher-order computational tasks for processing signals in the environment in sensing applications.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our genetics section for the latest news on this subject. Please use one of the following formats to cite this article in your essay, paper or report:

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The Immune System Enables HIV-Infected T Cells To Transport The Virus Throughout The Body

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Main Category: HIV / AIDS
Also Included In: Immune System / Vaccines
Article Date: 03 Aug 2012 - 0:00 PDT Current ratings for:
The Immune System Enables HIV-Infected T Cells To Transport The Virus Throughout The Body
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A new study has discovered one more way the human immunodeficiency virus (HIV) exploits the immune system. Not only does HIV infect and destroy CD4-positive helper T cells - which normally direct and support the infection-fighting activities of other immune cells - the virus also appears to use those cells to travel through the body and infect other CD4 T cells. The study from Massachusetts General Hospital (MGH) investigators, which will appear in the journal Nature and has received advance online release, is the first to visualize the behavior of HIV-infected human T cells within a lymph node of a live animal, using a recently developed "humanized" mouse model of HIV infection.

"We have found that HIV disseminates in the body of an infected individual by 'hitching a ride' on the T cells it infects," says Thorsten Mempel, MD, PhD, of the MGH Center for Immunology and Inflammatory Diseases, who led the study. "Infected T cells continue doing what they usually do, migrating within and between tissues such as lymph nodes, and in doing so they carry HIV to remote locations that free virus could not reach as easily. There are drugs that can manipulate the migration of T cells that potentially could be used to help control the spread of virus within a patient."

When HIV is introduced into blood or tissues, the virus binds to CD4 molecules on the surface of helper T cells, injecting its contents into cells and setting off a process that leads to the assembly and release of new virus particles. It has long been assumed that these free virus travel by diffusion through tissue fluids to encounter new cells that can be infected. But recent studies have suggested that HIV can also pass directly from cell to cell when structures called virological synapses form during long-lasting interactions between T cells. Since CD4 T cells usually migrate quickly and form only transient contacts with other cells, the current study was designed to examine whether HIV alters the migration of infected T cells, allowing the kind of persistent contact that facilitates the spread of infection.

The team's experiments used the humanized BLT mouse model, which has what is essentially a human immune system and is the only non-primate that can be infected with HIV. After first confirming that human T cells enter and normally migrate within the animals' lymph nodes - known to be important sites of HIV replication - the researchers injected the animals with HIV engineered to express green fluorescent protein (GFP), allowing them to track the movement of infected cells within living animals using a method called intravital microscopy. They first observed that, within two days, infected T cells continued to migrate and were uniformly distributed within lymph nodes but remained in nodes closest to the site of injection.

While the HIV-infected cells actively moved within lymph nodes, they did not move as quickly as comparable but uninfected T cells. In addition, 10 to 20 percent of the HIV-infected T cells formed abnormally long and thin extensions that appeared to trail behind moving cells, often exhibiting branches.

The researchers hypothesized that the HIV envelope protein, which is expressed on the surface of infected T cells before they release new virus particles, might cause infected cells to form tethering contacts with uninfected cells, producing these extensions. A series of experiments verified that the elongated shape of some infected cells requires the presence of the envelope protein and that many of the elongated cells contained multiple nuclei, suggesting they had been formed by the fusion of several cells.

To test the role of T cell migration in HIV infection, the researchers injected another group of BLT mice with HIV and at the same time treated them with an agent that prevents T cells from leaving lymph nodes. Two months later, levels of HIV in the bloodstream and in lymph nodes distant from the site of injection were much lower than in untreated HIV-infected animals, supporting the importance of T cell migration to carry virus throughout the body. Treatment with the migration-suppressing agent, however, did not reduce viral levels in animals with already established HIV infection.

"While our observation of tethering interactions between infected and uninfected CD4-expressing cells suggest that HIV may be transmitted between T cells by direct contact, we will have to clearly show this in future studies and explore how important it is relative to the transmission by free virus," explains Mempel, an assistant professor of Medicine at Harvard Medical School. He adds that the availability of the BLT mouse was instrumental in their ability to carry out this study. "This approach provides a new vantage point to investigate previously unexplored aspects of HIV pathogenesis."

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our hiv / aids section for the latest news on this subject. Lead author of the Nature paper is Thomas Murooka, PhD, of the MGH Center for Immunology and Inflammatory Diseases (CIID). Additional co-authors are Maud Deruaz, PhD, Francesco Marangoni, PhD, Vladimir Vrbanac, DVM, Edward Seung, PhD, Andrew Tager, MD, and Andrew Luster, MD, PhD, MGH CIID; and Ulrich von Andrian, Harvard Medical School. The study was supported by grants from the National Institutes of Health and the Ragon Institute of MGH, MIT and Harvard.
Massachusetts General Hospital Please use one of the following formats to cite this article in your essay, paper or report:

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'The Immune System Enables HIV-Infected T Cells To Transport The Virus Throughout The Body'

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'Antisense' Compound Rids Muscle Cells Of Toxic RNA: A Promising Step Toward Muscular Dystrophy Treatment

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Main Category: Muscular Dystrophy / ALS
Also Included In: Genetics
Article Date: 03 Aug 2012 - 0:00 PDT Current ratings for:
'Antisense' Compound Rids Muscle Cells Of Toxic RNA: A Promising Step Toward Muscular Dystrophy Treatment
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Scientists have reversed symptoms of myotonic muscular dystrophy in mice by eliminating a buildup of toxic RNA in muscle cells. The work, carried out by scientists at the University of Rochester Medical Center, Isis Pharmaceuticals Inc. and Genzyme, is published in Nature.

After experimental antisense compounds were administered to mice twice a week for four weeks, symptoms of the disease were reduced for up to one year - a significant portion of a mouse's lifespan.

The investigators say that while the work is an encouraging step forward against myotonic dystrophy, one of the most common forms of muscular dystrophy, it's too soon to know whether the approach will work in patients. But they are cautiously optimistic, noting that the compound is extremely effective at reversing the disease - whose genetic underpinnings make it particularly vulnerable to an antisense approach - in a mouse model.

"These results give us strong encouragement about the possibility of developing a treatment that could fundamentally alter the disease. It's an important step on a long path," said senior author Charles Thornton, M.D., a neurologist at the University of Rochester Medical Center who has been pursuing new treatments for the disease for more than two decades.

"But, it's too early to know if this treatment will work as well in people as it did in the laboratory. Unfortunately, in biomedical research there are previous examples of compounds that worked in mice but not in people," added Thornton, the Saunders Family Distinguished Professor in Neuromuscular Research.

About 35,000 Americans have myotonic dystrophy, an inherited disorder that is marked by progressive muscle weakness and stiffness; eventually many patients have difficulty walking, swallowing, and breathing. The disease can also affect the eyes, the heart, and the brain. While there are medications to treat some of the disease symptoms, there is no drug to stop its progression.

The recent progress comes about a decade after several scientists, including Thornton, discovered that the genetic defect that causes the disease works quite differently than most other inherited diseases. In many diseases, a genetic flaw means that an important protein is not made correctly, or not made at all.

But in myotonic dystrophy, the defect results in the creation of an abnormal messenger RNA, which accumulates in the nucleus, getting in the way and stopping other proteins from doing their jobs. One of those proteins is MBNL1, which helps create chloride channels that are important for electrical control of muscles. When that process is thwarted, muscles send errant electrical signals, causing symptoms.

The approach outlined in the Nature paper exploits the roots of the defect, harnessing an enzyme whose usual job is to cut RNA into pieces. Working closely with the Rochester and Genzyme teams, scientists at Isis created synthetic compounds - short snippets of chemically modified DNA - that bind to the toxic RNA, modifying it in such a way that it was targeted for destruction by one of the body's own enzymes, RNase H.

With the team's most effective compounds, symptoms in the mice were reversed. The level of toxic RNA was reduced by more than 80 percent; stiffness in muscles eased dramatically; the microscopic structure of muscle was improved; and electrical signaling in muscles returned to normal.

The possibility of targeting "toxic RNA" - a buildup of abnormal RNA causing cellular processes to go awry - makes myotonic dystrophy an excellent target for antisense drugs, said Thornton.

The compounds are called "antisense" because their genetic code is the mirror image of the target RNA strand, known in scientific parlance as the "sense" molecule. The antisense compound will only stick to the precise RNA that is part of the myotonic dystrophy gene, leaving thousands of other vitally important RNAs alone.

While antisense technology has been in development for a couple of decades, it has not been effective at eliminating RNA in muscle cells until now. Results like those in the Nature paper are creating enthusiasm particularly among scientists who study neurodegenerative diseases, Thornton says. He points to promising work by a team from the University of California at San Diego on Huntington's disease, as well as research out of Cold Spring Harbor Laboratory on spinal muscular atrophy.

"For 20 years we studied myotonic dystrophy, hoping that someday we would learn enough to spot its Achilles heel," said Thornton. "This work comes close to doing that.

"I know it is unscientific for me to think so, but I can't help but see a little glimmer of 'medical justice' in this approach. For the same reason that the toxic RNA makes people sick, by hanging around too long in the nucleus and gumming up the works, it also becomes more susceptible to antisense drugs, because these drugs seem to work extraordinarily well against RNA in the nucleus," he added.

"Based upon these exciting preclinical data, we have initiated a drug discovery project for myotonic dystrophy with Dr. Thornton's team to identify an antisense drug to begin clinical testing," said C. Frank Bennett Ph.D., Senior Vice President, Research at Isis Pharmaceutical, Inc. "Myotonic dystrophy represents an ideal opportunity for an antisense drug as the disease-causing gene produces a toxic RNA that is not easily targeted with other therapeutic approaches. In just a few years, we have been able to expand our severe and rare disease franchise and maintain a broad research program, in which we are evaluating many different diseases that could be treated with an antisense drug."

Thornton was inspired to create a robust research effort to address the disease largely because of his experience treating patients. He is co-director of the Medical Center's Wellstone Muscular Dystrophy Cooperative Research Center, one of the world's top centers for the treatment of muscular dystrophy. He is also a scientist in the Center for Neural Development and Disease, where he runs a laboratory looking at the roots of the disease and exploring new treatments. On any given day, he is both seeing patients coping with conditions like myotonic dystrophy, as well as running laboratory experiments aimed at stopping the disease altogether.

As the research progressed, Thornton struck up a collaboration with Isis Pharmaceuticals Inc., the creator of the only antisense medication on the market, and Genzyme, a company with experience treating muscle diseases. Earlier this summer Isis announced an agreement with Biogen Idec Inc. to explore antisense treatments for myotonic dystrophy - an effort closely linked to Thornton's work.

Now scientists at Isis and the University of Rochester are working to improve their lead compound further, developing antisense compounds with stronger activity against the toxic RNA, but with minimal effects on the rest of the body. An unknown factor at this point, Thornton says, is whether the compounds will also improve the muscle-wasting aspect of the disease. That symptom, which causes great difficulty for patients, has been hard for scientists to create in mice, and so it's difficult to predict how it might respond to antisense knockdown technology.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our muscular dystrophy / als section for the latest news on this subject. The first author of the paper is Thurman Wheeler, M.D., assistant professor of Neurology at the University of Rochester Medical Center, who conducted many of the experiments. Other authors include Masayuki Nakamori, now at the University of Osaka in Japan; Sanjay Pandey, A. Robert MacLeod, and C. Frank Bennett of Isis Pharmaceuticals; and Andrew Leger, Seng Cheng, and Bruce Wentworth of Genzyme.
The work was funded by the National Institute of Neurological Disorders and Stroke, the National Institute of Arthritis and Musculoskeletal and Skin Diseases, the Saunders Family Neuromuscular Research Fund, Run America, the Muscular Dystrophy Association, and the Uehara Memorial Foundation.
University of Rochester Medical Center Please use one of the following formats to cite this article in your essay, paper or report:

MLA

n.p. "'Antisense' Compound Rids Muscle Cells Of Toxic RNA: A Promising Step Toward Muscular Dystrophy Treatment." Medical News Today. MediLexicon, Intl., 3 Aug. 2012. Web.
5 Aug. 2012. APA

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''Antisense' Compound Rids Muscle Cells Of Toxic RNA: A Promising Step Toward Muscular Dystrophy Treatment'

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Molecule Discovered That Converts Stem Cells Into Heart Cells

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Main Category: Heart Disease
Also Included In: Stem Cell Research
Article Date: 05 Aug 2012 - 0:00 PDT Current ratings for:
Molecule Discovered That Converts Stem Cells Into Heart Cells
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For years, scientists have been looking for a good source of heart cells that can be used to study cardiac function in the lab, or perhaps even to replace diseased or damaged tissue in heart disease patients. To do this, many are looking to stem cells. Researchers at Sanford-Burnham Medical Research Institute (Sanford-Burnham), the Human BioMolecular Research Institute, and ChemRegen, Inc. have been searching for molecules that convert stem cells to heart cells for about eight years - and now they've found one. Writing in Cell Stem Cell, the team describes how they sifted through a large collection of drug-like chemicals and uncovered ITD-1, a molecule that can be used to generate unlimited numbers of new heart cells from stem cells.

"Heart disease is the leading cause of death in this country. Because we can't replace lost cardiac muscle, the condition irreversibly leads to a decline in heart function and ultimately death. The only way to effectively replace lost heart muscle cells - called cardiomyocytes - is to transplant the entire heart," said Mark Mercola, Ph.D., director of Sanford-Burnham's Muscle Development and Regeneration Program and senior author of the study. "Using a drug to create new heart muscle from stem cells would be far more appealing than heart transplantation."

Searching for a needle in a haystack

Stem cells are important because they do two unique things - 1) self-renew, producing more stem cells and 2) differentiate, becoming other, more specialized cell types. To obtain a large number of a certain cell type, such as heart cells, the hard part is figuring out the signals that direct them to become the desired cell type.

Mercola's group has been hunting for heart-inducing signals for 15 years - in embryos and in stem cells. To find a synthetic molecule that might one day lead to a drug therapy to regenerate the heart, they joined forces with a team of medicinal chemists at the Human BioMolecular Research Institute led by John Cashman, Ph.D. With funding from the California Institute for Regenerative Medicine, they used sophisticated robotic technology to methodically test a large collection of drug-like chemicals, looking for that needle in a haystack that, when added to stem cells, results in cardiomyocytes. The winning compound was ITD-1.

Therapeutic applications

There's no shortage of therapeutic possibilities for ITD-1. "This particular molecule could be useful to enhance stem cell differentiation in a damaged heart," explained Erik Willems, Ph.D., postdoctoral researcher in Mercola's lab and first author of the study. "At some point, it could become the basis for a new therapeutic drug for cardiovascular disease - one that would likely limit scar spreading in heart failure and promote new muscle formation."

Mercola, Willems, and Cashman are now working with San Diego biotech company ChemRegen, Inc. to further develop ITD-1 into a drug that one day might be used to treat patients.

More scientific detail

The researchers discovered that ITD-1 blocks a cellular process known as TGF? signaling. TGF? (short for transforming growth factor-?) is a protein produced by one cell type to influence others' behaviors, such as proliferation, scarring, and even stem cell differentiation. TGF? works from outside the cell, binding to a receptor on the surface of a responding cell to initiate an intracellular signaling cascade that causes genes to be switched on or off, ultimately altering cellular behavior - in this case making heart muscle.

ITD-1 triggers degradation of the TGF? receptor, thus inhibiting the whole process. With TGF? signaling turned off, stem cells are set on a course toward cardiogenesis. ITD-1 is the first selective inhibitor of TGF?, meaning that it might also have applications in many other processes controlled by TGF?.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our heart disease section for the latest news on this subject. This research was funded by the California Institute for Regenerative Medicine, the National Heart, Lung, and Blood Institute of the U.S. National Institutes of Health, the Human BioMolecular Research Institute, the American Heart Association, the German Research Foundation, and the T Foundation.
The study was co-authored by Erik Willems, Sanford-Burnham and ChemRegen Inc.; Paul J Bushway and Joaquim Cabral-Teixeira, Sanford-Burnham; Dennis Schade, ChemRegen Inc. and Human BioMolecular Research Institute; Wenqing Cai, Sanford-Burnham; Patrick Reeves, Harvard Medical School; Marion Lanier, ChemRegen Inc. and Human BioMolecular Research Institute; Christopher Walsh, Salk Institute for Biological Studies; Tomas Kirchhausen, Harvard Medical School; Juan Carlos Izpisua Belmonte, Salk Institute for Biological Studies and Center for Regenerative Medicine in Barcelona; John Cashman, ChemRegen Inc. and Human BioMolecular Research Institute; Mark Mercola, Sanford-Burnham and ChemRegen Inc.
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joi, 15 decembrie 2011

Ability Of Brown Fat To Burn Calories Linked To Immune Cells

Main Category: Obesity / Weight Loss / Fitness
Article Date: 15 Dec 2011 - 0:00 PST

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Throughout the interior spaces of humans and other warm-blooded creatures is a special type of tissue known as brown fat, which may hold the secret to diets and weight-loss programs of the future.

Unlike ordinary "white" fat, in which the body stores excess calories, brown fat can burn calories to heat up the body. It's one of the things that helps keep wild critters warm on cold nights.

Investigating how brown fat works in mice, a team of researchers at the University of California, San Francisco (UCSF) has uncovered what may be a holdover from our evolutionary past: in response to cold, tiny immune cells known as macrophages can switch on the brown fat, inducing it to burn energy to make heat.

Prior to this research, published last month in the journal Nature, scientists had assumed that brown fat metabolism was completely controlled by the brain. But the UCSF research suggests that the immune system plays a backup role in this process - a legacy, perhaps, of some ancient ancestral creature whose metabolic and immune systems were much more intertwined.

"This is a very important secondary system that the body uses to provide a backup for the thermal stress response," said Ajay Chawla, MD, PhD, an associate professor at UCSF's Cardiovascular Research Institute who led the research. "It raises the possibility that we can perhaps modulate this program and enhance it in humans to rev up metabolism."

Immune Cells Found Inside Brow

The modern human immune system relies on these macrophages to gobble up bacteria, helping protect us against infection. Macrophages were never known to play a role in metabolism, but the evidence Chawla and his colleagues gathered suggests otherwise.

Using brown fat to burn calories and produce heat is one of the ways that mammals maintain thermoregulation - an essential adaptation that defines warm blooded creature and enables them to thrive in the face of challenging environmental extremes. Not all animals share this ability.

Many animals, like lizards, are "cold blooded" or exothermic. They maintain their body temperature through completely external means, sunbathing at certain times of the day and huddling in warm, protective places at night. This naturally limits their range and explains why lizards, so abundant in tropical climates, are far rarer in cold climates.

Mammals, on the other hand, are "warm-blooded" or endothermic. They produce heat internally by a variety of means: shivering, sweating, regulating the size of their blood vessels and burning off excess calories in brown fat.

Scientists have known for years that brown fat burns calories in response to signals from the brain. These signals cause break down of molecules known as triglycerides in white fat, which are then released into the bloodstream as fatty acids. These circulating fatty acids are taken up by brown fat and burned to generate heat. Brown fat is full of blood vessels, and the heat warms the blood, which in turn circulates and warms the body.

The brain controls this process by monitoring the body's temperature and, in face of extreme cold, releasing a hormone called norepinephrine, which kick-starts the brown fat.

The work of the UCSF team showed that macrophage cells within the brown fat can also do this directly. Macrophages residing in brown and white fat produce an enzyme that makes norepinephrine when mice are exposed to the cold. This leads to the production, the breakdown and mobilization of stored fat, which is then burned in brown fat to produce heat.

What these results suggest, Chawla said, is that immune cells help facilitate the function of brown fat.

Mammals today have evolved to have separate systems for immunity and metabolism. But flies, for instance, have combined the equivalent functions of the human liver, fat and immune system into one organ: a tissue referred to as its fat body. Mammalian macrophages may have some functions related to this shared origin.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our obesity / weight loss / fitness section for the latest news on this subject. The article, “Alternatively activated macrophages produce catecholamines to sustain adaptive thermogenesis” by Khoa D. Nguyen, Yifu Qiu, Xiaojin Cui, Y. P. Sharon Goh, Julia Mwangi, Tovo David, Lata Mukundan, Frank Brombacher, Richard M. Locksley and Ajay Chawla appeared in the Nov. 20 issue of Nature.
In addition to UCSF, the authors of this study are affiliated with Stanford University and the University of Cape Town, South Africa.
This work was funded by grants from the National Institutes of Health and the Larry L. Hillblom Foundation; by an National Institutes of Health Director’s Pioneer Award; and by Stanford Graduate and
A-STAR Fellowships.
University of California - San Francisco Please use one of the following formats to cite this article in your essay, paper or report:

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Intestine Crucial To Function Of Immune Cells, Research Shows

Main Category: Immune System / Vaccines
Also Included In: GastroIntestinal / Gastroenterology;  Arthritis / Rheumatology;  Multiple Sclerosis
Article Date: 15 Dec 2011 - 0:00 PST

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Researchers at the University of Toronto have found an explanation for how the intestinal tract influences a key component of the immune system to prevent infection, offering a potential clue to the cause of autoimmune disorders like rheumatoid arthritis and multiple sclerosis.

"The findings shed light on the complex balance between beneficial and harmful bacteria in the gut," said Prof. Jennifer Gommerman, an Associate Professor in the Department of Immunology at U of T, whose findings were published online by the scientific journal, Nature. "There has been a long-standing mystery of how certain cells can differentiate between and attack harmful bacteria in the intestine without damaging beneficial bacteria and other necessary cells. Our research is working to solve it."

The researchers found that some B cells - a type of white blood cell that produces antibodies - acquire functions that allow them to neutralize pathogens only while spending time in the gut. Moreover, this subset of B cells is critical to health.

"When we got rid of that B-cell function, the host was unable to clear a gut pathogen and there were other negative outcomes, so it appears to be very important for the cells to adopt this function in the gut," said Prof. Gommerman, whose lab conducted the research in mice.

Textbook immunology - based mostly on research done in the spleen, lymph nodes or other sterile sites distant from gut microbes - has suggested that B cells develop a specific immune function and rigidly maintain that identity. Over the last few years, however, some labs have shown the microbe-rich environment of the gut can induce flexibility in immune cell identity.

Prof. Gommerman and her colleagues, including trainees from her lab Drs. Jörg Fritz, Olga Rojas and Doug McCarthy, found that as B cells differentiate into plasma cells in the gut, they adopt characteristics of innate immune cells - despite their traditional association with the adaptive immune system. Specifically, they begin to look and act like inflammatory cells called monocytes, while maintaining their ability to produce a key antibody called Immunoglobulin A.

"What intrigued us was that this theme - B cells behaving like monocytes - had been seen before in fish and in vitro. But now we have a living example in a mammalian system, where this kind of bipotentiality is realized," said Prof. Gommerman.

This B-cell plasticity provides a potential explanation how cells dedicated to controlling pathogens can respond to a large burden of harmful bacteria without damaging beneficial bacteria and other cells essential for proper function of the intestine.

It also may explain how scientists had failed to appreciate the multi-functionality of some B cells. "There are classical markers immunologists use to identify B cells - receptors that are displayed on their surface - and most of them are absent from plasma cells," said Prof. Gommerman. "So in some cases, what people thought was a monocyte could have been a plasma cell because it had changed its surface identity, although monocytes play an important role in innate immunity as well."

This transformational ability, the researchers also found, is dependent on bacteria called commensal microflora that digests food and provides nutrients. That relationship highlights the importance of the gut in fighting infection, and begs the question of whether plasma cells trained in the gut to secrete specific anti-microbial molecules can play a role in other infectious disease scenarios, such as food-borne listeria infection.

It also opens a line of investigation into whether a systemic relationship exists between those anti-microbial molecules and healthy cells in sites remote from the intestine. Understanding the nature of that relationship could improve understanding of inflammatory mechanisms in autoimmune disorders such as lupus, rheumatoid arthritis and multiple sclerosis, in which immune cells attack and eventually destroy healthy tissue.

But the next step, said Prof. Gommerman, is to look at human samples for the same type of multi-potentiality they saw in rodent plasma cells that acquired their anti-microbial properties in the gut.

"We're really at the early stages of understanding what we call the microbiome in the gut," said Prof. Gommerman. "There is a role for plasma cells in many autoimmune diseases, and B cells can do a lot more than just make antibodies. We need to understand the full spectrum of their effects within the immune response."

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our immune system / vaccines section for the latest news on this subject. The study was funded by the Canadian Institutes of Health Research, the Canada Foundation for Innovation, the Ontario Research Fund, the Austrian Academy of Sciences and the National Institutes of Health.
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marți, 13 decembrie 2011

How Do BRCA1 Mutations Harm Breast Cells? Researchers Demonstrate

Editor's Choice
Academic Journal
Main Category: Breast Cancer
Also Included In: Cancer / Oncology;  Genetics
Article Date: 13 Dec 2011 - 9:00 PST

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Researchers at the Johns Hopkins Kimmel Cancer Center have demonstrated during their work with breast cells that breast cells become vulnerable to cancer if a single copy of the breast cancer gene BRCA1 is inactivated. It causes genetic instability in the cells through reducing their ability to repair DNA damage.

The leading risk factor for hereditary breast cancer is an inherited mutation in the BRCA1 gene which requires close monitoring or prompt preventive mastectomy.

The breakthroughs might help researchers develop a drug that prevents hereditary breast cancer, as well as tools to identify those who benefit most from prophylactic treatments. The study is published in the Proceedings of the National Academy of Sciences Oct. 25.

Exactly how BRCA1 inactivation increases the risk of cancer has remained a mystery. BRCA1 is believed to be a "tumor suppressor" gene. Usually, cancer is not caused by the loss of one copy of such genes, as each individual is born with two copies of each gene (one from each parent), and the second copy is sufficient in keeping cells healthy in a similar way that a car can stop safely after losing control of the front brakes as the rear brakes are still working.

According to the researchers, cancer seems to develop in such cases only after the second copy of the gene is damaged, i.e. random mutation during cell division, resulting in uncontrolled cell growth.

Mouse models of BRCA-related cancers have demonstrated that damage to genes, such as TP53, occurred prior to damage to the second copy of BRCA.

Ben Ho Park, M.D., Ph.D., associate professor of oncology at the Johns Hopkins Kimmel Cancer Center, explained:

"In theory, this process would take a long time and BRCA-related breast cancers
occur at an early age."

For the investigation, the team used novel technology in order to insert a single copy of a typical BRCA1 mutation into normal breast cells.

The main theory has been that the original inactivation of a single copy of BRCA1 produces additional DNA mutations to expand more rapidly than normal - a condition called "genomic instability."

Park explains:

"The protein coded by BRCA1 is involved in repairing major DNA breaks, so it would make sense that its inactivation could weaken a cell's resistance to DNA mutations."

However, Park adds that the consequence of losing a single copy of BRCA1 was hard to model and difficult to investigate. Results from prior attempts to produce mice with single-copy BRCA1 mutations were uncertain as the mice were unable to demonstrate the pattern of human cancers. Furthermore, it has been hard for investigators to create human cell lines in which the only flaw is a single mutated copy of BRCA1.

In order to test their theory, the team first selected cell lines obtained from non-cancerous human breast epithelial cells - where BRCA1 breast cancers originate. An advanced gene-targeting method was then used to generate novel cell lines that have a typical cancer-associated BRCA1 mutation in just one copy of the gene.

? Following this, tests were conducted on both cell types - cells with the BRCA1 mutation, and the original cells with two healthy copies of BRCA1 - to compare their DNA repair activity. The team demonstrated that cells with BRCA1 mutations were not as effective at carrying out the type of DNA repair known to involve the BRCA1 protein.

They found that when exposed to a DNA-damaging chemotherapy medication or radiation the BRCA1-mutated cells were more likely to die. In addition, BRCA1-mutated cells that were allowed to divide for many weeks were more likely to lose additional genes, includes those frequently mutated in breast tumors. Similar genetic losses were observed on non-cancerous breast cells taken from women with BRCA1 mutations.

Park said:

"What this shows is that having only a single working copy of BRCA1 really does bring about changes in a cell that would be expected to give rise to cancer.

We hope to use this new system to introduce other known BRCA1 mutations, to get a better idea of the relative cancer risk each individual mutation represents, because right now there are few good ways to do that. In the future, we hope to further define risk so that family members with one type of BRCA1 mutation may be advised to get preventative treatment or surgery, and those with other BRCA1 mutations could rely on careful screening."

In addition, the cell models might be helpful in determining the susceptibility of various BRCA1 mutations to drugs, Park adds. At present, anti-cancer medications known as PARP inhibitors are in clinical trials against tumors with BRCA1-mutations.

The lifetime risks of developing breast cancer has been shown among women born with a mutated copy of BRCA1 to range between 50% to 90%. In addition, they have high, but variable risks of ovarian and other cancers.

Written by Grace Rattue
Copyright: Medical News Today
Not to be reproduced without permission of Medical News Today

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In Pre-Leukemic Cells, 'PARP' Drug Sabotages DNA Repair

Main Category: Lymphoma / Leukemia / Myeloma
Also Included In: Genetics;  Breast Cancer
Article Date: 13 Dec 2011 - 3:00 PST

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Looking for ways to halt the uncontrolled growth of cancer cells, scientists at Johns Hopkins have found that a new class of drugs, called PARP inhibitors, may block the ability of pre-leukemic cells to repair broken bits of their own DNA, causing these cells to self-destruct. Results of their experiments, expected to be presented at the 53rd Annual Meeting of the American Society of Hematology in San Diego have already prompted clinical trials of the drugs in patients with aggressive pre-leukemic conditions, who have few treatment options.

The Johns Hopkins team analyzed the genomes of 144 patients with pre-leukemic conditions, collectively known as myeloproliferative disorders. They found deletions of several genes that control how cells repair their DNA. Many DNA repair-related pathways and genes have been linked to both cancer development and interruption of that process.

One of the potential defects identified during Hopkins' genome scan occurred in the BRCA2 gene, best known for causing hereditary breast cancer and one among many genes in a pathway that regulates DNA repair processes. With mistakes in the BRCA2 gene, pre-cancer and cancer cells must lean more heavily on other pathways to repair DNA in order to survive.

"To kill pre-cancer and cancer cells, we have to disrupt the other DNA repair pathways that are keeping them alive," says Michael McDevitt, M.D., Ph.D., assistant professor of medicine and oncology at Johns Hopkins and co-leader of the study.

Some studies indicate BRCA2-mutated cells are sensitive to treatment with "PARP" inhibitors, drugs that block specific DNA-repair proteins. PARP, or poly (ADP-ribose) polymerase, inhibitors are being tested in early clinical trials at Johns Hopkins and elsewhere to treat breast and certain blood cancers.

To test PARP inhibitors' therapeutic potential for pre-leukemias, McDevitt and his colleagues at the Mayo Clinic focused on one particular DNA repair pathway called homologous recombination. Some 15 samples of pre-leukemic cells were irradiated and then tested for their ability to form protein complexes, a first step to repairing the radiation-induced damage. Six of the 15 samples formed no protein complexes, a sign that the homologous recombination pathway was disrupted, and each of the six samples was three to five times more sensitive to PARP inhibitors than were normal cells.

Portions of pre-leukemic cells also were grown in culture and treated with PARP inhibitors to determine whether they could clump together and form colonies, a sign of viable cells. Fewer pre-leukemic cells treated with PARP inhibitors were able to form colonies, an indication that the therapy may be effective for pre-leukemias.

"It's important that PARP drugs target mainly cancer cells while sparing normal cells," says Keith Pratz, M.D., assistant professor of oncology at Johns Hopkins. "Most normal cells may not be affected by PARP inhibitors because they have more than one DNA repair pathways to rely on."

Pratz and McDevitt are conducting clinical trials of PARP inhibitors in patients with aggressive myeloproliferative disorders.

"There may be a subset of people with myeloproliferative disorders who can benefit from PARP inhibitors, and we hope that further testing in patients may help define this," says Pratz.

The outlook for patients with myeloproliferative disorders varies. "Some patients can do very well for a long time," says McDevitt. Median survival of patients with a myeloproliferative disorder called myelofibrosis is reportedly five years. Survival times are far shorter - perhaps as short as 15 to 20 months - for many patients with chronic myelomonocytic leukemia, says McDevitt. When a myeloproliferative disorder progresses to acute leukemia, most patients survive only a few months.

Patients with the disorders experience infections, high white blood cell counts, and anemia. No curative treatments, other than bone marrow transplants, are available.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our lymphoma / leukemia / myeloma section for the latest news on this subject. The clinical trials of PARP inhibitors at Johns Hopkins are funded by the National Cancer Institute.
In addition to McDevitt and Pratz, investigators who contributed to the research include Alison Moliterno, Weijie Poh, James Herman, Robert Dilley, B. Douglas Smith, and Judith E. Karp at Johns Hopkins; Brian Koh, Anand Patel, and Scott Kaufman at the Mayo Clinic; and Christine O'Keefe and Jaroslaw Maciejewski at the Cleveland Clinic.
"Genetic and Epigenetic Defects in DNA Repair Lead to Synthetic Lethality of Poly (ADP-Ribose) Polymerase (PARP) Inhibitors in Aggressive Myeloproliferative Disorders, Abstract 400, Room 7AB, San Diego Convention Center, Dec 12.
On the Web: http://www.hopkinskimmelcancercenter.org
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luni, 12 decembrie 2011

Pluripotent Stem Cells From Pigs May Be Safer Than Previously Thought

Main Category: Stem Cell Research
Also Included In: Pharma Industry / Biotech Industry;  Cancer / Oncology;  Stroke
Article Date: 12 Dec 2011 - 1:00 PST

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Pig stem cell research conducted by two animal scientists at the University of Georgia reveals a better way to determine the safety of future stem cell therapies than rodent-based models.

Rodent studies are likely inadequate for testing many human therapies - including pharmaceuticals - since 50 percent of all chemicals test positive as carcinogens in rodents regardless of their source or identity, according to Thomas Hartung, a professor in the Bloomsburg College of Public Health at Johns Hopkins University. He suggests these rodent studies may be no better than a coin toss. For example, some components in coffee appear to be carcinogenic in rodents, but in humans moderate coffee consumption may reduce the risk of cancer.

In 2010, UGA faculty Steve Stice and Franklin West introduced 13 pigs that have shown promise in unlocking the path to new therapies. The pigs recently produced another positive finding: These adult-cell-sourced stem cells don't form tumors in pigs.

"Pluripotent stem cells have significant potential for stem cell therapies," said West, an animal science researcher and assistant professor in the UGA College of Agricultural and Environmental Sciences. "However, tests in mice often resulted in tumor formation that frequently led to death."

The formation of tumors has raised concerns about the safety of induced pluripotent stem cells, or iPSCs, and cells derived from these stem cells. Until now, all iPSC safety studies have been performed in rodent models.

"To address the concern, our research team studied tumor formation in pigs generated from pig iPSCs," West said. "Brain, skin, liver, pancreas, stomach, intestine, lung, heart, kidney, muscle, spleen and gonad tissues from all 11 pigs tested showed no evidence of tumors."

The absence of tumor formation in these pigs suggests that iPSCs can safely incorporate into tissues without tumor formation.

"Being able to safely use iPSCs without the potential of causing tumors is essential for this promising stem cell therapy to become a viable treatment option," said Stice, a Georgia Research Alliance Eminent Scholar in the College of Agricultural and Environmental Sciences. "We now have graduate students working on making neural cells from the human and pig stem cells to help further the studies. The human stem cells were effective in a rodent model for stroke, but rodent studies are not rigorous enough to start human clinical trials."

West agrees. "Over 700 drug treatments have gone to human clinical trials for stroke alone based on findings in rodents and have turned out not to be viable in humans," he said. "The pigs are much more human like, and they are going to be a much better model to study strokes."

West is leading a cooperative project between the UGA Regenerative Bioscience Center and stroke researchers at Georgia Health Sciences University. "This project will improve the speed and efficiency of treatment development for stroke and many other conditions and potentially reduce the number of nonhuman primates used in research," he said.

Additionally, Stice and West have now bred the pigs produced from iPSCs and have proven the stem cells did pass to the offspring. This finding opens the door for better animal-sourced tissue for human regenerative medicine such as islet cells that produce insulin for diabetic patients.

Using iPSC technology, the UGA Regenerative Bioscience Center is working with researchers at Emory University to make pigs whose cells from the pancreas would demonstrate decreased rejection in human treatments.

"The next step would be to put these pig insulin-producing cells into other animals, potentially dogs or cats suffering from diabetes - to see if it will produce insulin for them without being rejected," Stice said. "So, it's moving forward. Never as fast as we like, but it's moving."

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our stem cell research section for the latest news on this subject. Their research results were published in the October issue of Stem Cells. For an abstract of the study, see http://www.ncbi.nlm.nih.gov/pubmed/22039609.
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In Newly Diagnosed Inflammatory Breast Cancer, Circulating Tumor Cells Not Linked To Survival

Main Category: Breast Cancer
Also Included In: Medical Devices / Diagnostics
Article Date: 12 Dec 2011 - 1:00 PST

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The presence of circulating tumor cells in the blood appears to have no relationship to survival in women who have just been diagnosed with inflammatory breast cancer, according to new research from Fox Chase Cancer Center. However, the research shows that these stray tumor cells may signal that the disease has spread to other parts of the body, even before imaging reveals any metastases. The results were presented at the 2011 CTRC-AACR San Antonio Breast Cancer Symposium.

If a woman is diagnosed with inflammatory breast cancer, a particularly fast-growing form of the disease, doctors should consider close imaging to monitor and possibly continue aggressive treatment if she also has circulating tumor cells (CTCs), regardless of what imaging shows, recommends study author Massimo Cristofanilli, M.D., F.A.C.P., chair of the department of medical oncology at Fox Chase. "You should be carful before stopping treatment in someone who has evidence of circulating cells, particularly when dealing with a disease like inflammatory breast cancer, which can progress rapidly."

Previous research by Cristofanilli and his colleagues found that the number of stray cancer cells circulating in the blood is the best predictor of both how long a woman with metastatic breast cancer will live and the amount of time until her cancer progresses. But the researchers have also found that the presence or lack of CTCs has little to say about prognosis in women with metastatic inflammatory breast cancer, an aggressive disease with extremely poor outcomes in spite of multidisciplinary modality treatment.

During the current study, Cristofanilli and his team reviewed the records of 84 women who had just learned they have inflammatory breast cancer, either in stage III or stage IV. A total of 64 (76.2%) women had at least 1 CTC and 29 (34.5%) had at least 5. The researchers found that women with no CTCs had comparable survival and spent the same amount of time progression-free as women with one or more CTCs. The results suggest that there is little prognostic value in measuring CTCs in women newly diagnosed with inflammatory breast cancer.

It's not clear why CTCs appear to be linked to prognosis in some forms of cancer but not others, says Cristofanilli. Inflammatory breast cancer is already an aggressive disease, he says, so compared to other forms of breast cancer whether or not cells have broken off and entered the blood may say little more about an otherwise already aggressive disease.

Inflammatory breast tumors are typically fast-growing, and travel quickly to lymph nodes and the brain. During follow-up in the current study, which lasted more than 22 months for half of patients, more than 30% of the entire group had died.

Perhaps "the most important finding from the study," says Cristofanilli, is that more than three-quarters of women who just learned they have inflammatory breast cancer had CTCs that can be detected in the blood. In comparison, he adds, only 15% of women with non-inflammatory breast cancer typically have CTCs. "So there is a huge difference in inflammatory breast cancer and other forms of breast cancer." These stray tumor cells, therefore, may indicate something about inflammatory breast cancer, he reasons, perhaps serving as an early sign that it has already spread. Indeed, only approximately one-third of women with inflammatory breast cancer have detectable metastases at diagnosis, but 60% will eventually develop them.

Currently, says Cristofanilli, doctors primarily measure CTCs in women with metastatic disease, since a decrease in CTCs can signal that treatment is working. But given that most women with inflammatory breast cancer are likely metastatic at the time of diagnosis, this test could serve another purpose - to guide doctors towards more aggressive and prolonged forms of treatment, says Cristofanilli. "If women with inflammatory breast cancer have CTCs, perhaps we should continue to treat them as if they have already established metastatic breast cancer, even if imaging does not show metastases."

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our breast cancer section for the latest news on this subject. Co-authors include Michal Mego, Antonio Giordano, Ugo De Giorgi, Limin Hsu, Anthony Lucci, Shaheenah Dawood, Wendy A. Woodward, Naoto T. Ueno, Vicente Valero, Eleni Andreopoulou, Gabriel N. Hortobagyi, and James M. Reuben.
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vineri, 9 decembrie 2011

Experimental Drug Targets Breast Cancer Stem Cells

Main Category: Breast Cancer
Also Included In: Stem Cell Research
Article Date: 09 Dec 2011 - 1:00 PST

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In a novel therapeutic approach to treating breast cancer, Loyola University Medical Center researchers are reporting positive results from a clinical trial of a drug that targets tumor stem cells.

Existing cancer drugs are effective in killing mature cancer cells. But a handful of cancer stem cells are resistant to such drugs. They survive and go on to develop into new tumor cells.

A pilot study at Loyola found that an experimental drug known as a "notch inhibitor" appears to block this process by turning off key genes. Kathy Albain, MD, who led the study, presented findings during the 2011 CTRC-AACR San Antonio Breast Cancer Symposium.

Albain collaborated with scientists from Loyola, University of Mississippi Cancer Center, Baylor Breast Center and Merck Oncology.

"Our results suggest a potential role that notch inhibitors could play in optimizing existing therapies and in overcoming resistance to cancer drugs," Albain said.

The so-called notch protein promotes tumor growth and survival. The protein is present on the surface of cancer stem cells. The protein latches on to other cells, and the resulting "molecular handshake" activates various genes in the stem cells. Activating these genes, in effect, makes the stem cells resistant to common cancer drugs.

The study included 20 patients who finished all therapy. The women all had early-stage, estrogen-receptor-positive breast cancer.

Prior to surgery, the patients received one of two commonly used drugs, tamoxifen or letrozole. These drugs work by blocking estrogen stimulation of breast cancer cells. In addition to tamoxifen or letrozole, patients also received the experimental notch-inhibitor drug, MK-0752.

Following treatment with the notch inhibitor, patients underwent biopsies to provide tumor specimens. Researchers found that the drug turned off the key genes that in effect would have kept the tumor stem cells resistant to conventional drugs.

"The notch inhibitor appears to be doing what it is intended to do," said Clodia Osipo, PhD, a breast cancer scientist in Loyola's Cardinal Bernardin Cancer Center.

There were minimal side effects from either the notch inhibitor or the estrogen-blocking drugs. One patient experienced puffy eyes and coughing and four patients experienced facial acne. No patients experienced diarrhea or surgical complications

The purpose of the study was to determine how well the notch inhibitor is tolerated and how it affects the expression of critical genes in cancer stem cells. The next step is to determine how effective the drug would be in treating breast cancer.

Researchers proposed a randomized clinical trial, in which patients who received estrogen-blocking drugs before surgery would be compared to patients who received estrogen-blocking drugs plus a notch inhibitor.

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our breast cancer section for the latest news on this subject. Clinical trial costs were funded by Swim Across America, an annual event in which swimmers raise money for the Cardinal Bernardin Cancer Center. Merck Oncology supplied the drugs and provided additional support.
Albain is a professor in the Department of Medicine, Division of Hematology/Oncology at Loyola University Chicago Stritch School of Medicine.
Co-authors of the study are Cheryl Czerlanis, Andrei Zlobin, Kyle R. Covington, Prabha Rajan, Constantine Godellas, Davide Bova, Shelly S. Lo, Patricia Robinson, Sharfi Sarker, Ellen R. Gaynor, Richard Cooper, Gerard Aranha, Kathy Czaplicki, Barbara Busby, Paola Rizzo, Tim Demuth, Patrick Stiff, Suzanne Fuqua and Lucio Miele.
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